dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000145_1|CGC1
Gene ID: MGYG000000145_00223
Location and strand information: 248569 - 251595 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 4.7166
Protein molecular weight: 115494.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000145_1|CGC1
Gene ID: MGYG000000145_00224
Location and strand information: 251687 - 252520 (-)
Family: 3.A.1.1.18
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000145_1|CGC1
Gene ID: MGYG000000145_00225
Location and strand information: 252522 - 253415 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000145_1|CGC1
Gene ID: MGYG000000145_00226
Location and strand information: 253490 - 254851 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: Multiple sugar-binding protein

Gene clsuter ID: MGYG000000145_1|CGC1
Gene ID: MGYG000000145_00227
Location and strand information: 254952 - 256505 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Regulator of RpoS

Gene clsuter ID: MGYG000000145_1|CGC1
Gene ID: MGYG000000145_00228
Location and strand information: 256502 - 258280 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000145_1|CGC1
Gene ID: MGYG000000145_00229
Location and strand information: 258353 - 260053 (-)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.492
Protein molecular weight: 64589.38
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000145_1|CGC1
Gene ID: MGYG000000145_00230
Location and strand information: 260100 - 261281 (-)
Family: GH88
Protein type: CAZyme
Protein description: Unsaturated chondroitin disaccharide hydrolase
Protein isoelectric point: 4.9501
Protein molecular weight: 45298.03
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000145_1|CGC1
Gene ID: MGYG000000145_00231
Location and strand information: 261298 - 262134 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000145_1|CGC1
Gene ID: MGYG000000145_00232
Location and strand information: 262153 - 263220 (-)
Family: 3.A.1.1.20
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000000145_1|CGC1
Gene ID: MGYG000000145_00233
Location and strand information: 263304 - 264650 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000145_1|CGC1
Gene ID: MGYG000000145_00234
Location and strand information: 264973 - 266853 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000145_1|CGC1
Gene ID: MGYG000000145_00235
Location and strand information: 266850 - 268466 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Chemotaxis response regulator protein-glutamate methylesterase

Gene clsuter ID: MGYG000000145_1|CGC1
Gene ID: MGYG000000145_00236
Location and strand information: 268479 - 270287 (+)
Family: PL0|PL33_1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9777
Protein molecular weight: 68923.12
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000145_1|CGC1
Gene ID: MGYG000000145_00237
Location and strand information: 270359 - 271408 (-)
Family: null
Protein type: null
Protein description: Ribosomal RNA small subunit methyltransferase H

Gene clsuter ID: MGYG000000145_1|CGC1
Gene ID: MGYG000000145_00238
Location and strand information: 271432 - 272001 (-)
Family: null
Protein type: null
Protein description: DNA-3-methyladenine glycosylase 1

Gene clsuter ID: MGYG000000145_1|CGC1
Gene ID: MGYG000000145_00239
Location and strand information: 272201 - 273523 (+)
Family: 2.A.66.1.28
Protein type: TC
Protein description: Multidrug export protein MepA

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000145_00223	Beta-galactosidase	CAZyme	248569	251595	-	GH2
MGYG000000145_00224	L-arabinose transport system permease protein AraQ	TC	251687	252520	-	3.A.1.1.18
MGYG000000145_00225	hypothetical protein	TC	252522	253415	-	3.A.1.1.11
MGYG000000145_00226	Multiple sugar-binding protein	STP	253490	254851	-	SBP_bac_1
MGYG000000145_00227	Regulator of RpoS	TF	254952	256505	-	HTH_AraC+HTH_AraC
MGYG000000145_00228	hypothetical protein	TC	256502	258280	-	8.A.59.2.1
MGYG000000145_00229	hypothetical protein	CAZyme	258353	260053	-	GH154
MGYG000000145_00230	Unsaturated chondroitin disaccharide hydrolase	CAZyme	260100	261281	-	GH88
MGYG000000145_00231	L-arabinose transport system permease protein AraQ	TC	261298	262134	-	3.A.1.1.11
MGYG000000145_00232	Lactose transport system permease protein LacF	TC	262153	263220	-	3.A.1.1.20
MGYG000000145_00233	hypothetical protein	STP	263304	264650	-	SBP_bac_1
MGYG000000145_00234	hypothetical protein	TC	264973	266853	+	8.A.59.2.1
MGYG000000145_00235	Chemotaxis response regulator protein-glutamate methylesterase	TF	266850	268466	+	HTH_AraC
MGYG000000145_00236	hypothetical protein	CAZyme	268479	270287	+	PL0\| PL33_1
MGYG000000145_00237	Ribosomal RNA small subunit methyltransferase H	null	270359	271408	-	Methyltransf_5
MGYG000000145_00238	DNA-3-methyladenine glycosylase 1	null	271432	272001	-	Adenine_glyco
MGYG000000145_00239	Multidrug export protein MepA	TC	272201	273523	+	2.A.66.1.28
Protein ID	Protein Name	Type	Start	End	Strand	Signature